• Discoverability Visible
  • Join Policy Invite Only
  • Created 02 Dec 2019

Submitting a SIMPLEG-WBM coupling job to the Purdue Brown cluster

SIMPLEG-WBM coupling :

# Set up an environment to run coupled models

  1. Singularity containers and their inputs are available at /depot/ssg/geoshare/data/GLASS/INFEWS/SIMPLEG_WBM_COUPLING directory.

Please make sure you have access privilege to that directory. Otherwise the following environment set up script will fail.

The following script will copy all necessary files to Brown’s scratch space, namely /scratch/brown/$USER/SIMPLEG_WBM_COUPLING. Here $USER stands for your account.

wooj@brown-fe02:~$ /depot/ssg/geoshare/data/GLASS/INFEWS/setup_wbm_simpleg_env.sh

Please copy/paste this command to the terminal and execute it.


This may take long as it copies about 40GB zip files and uncompress them. Once the set up is done, you will see these directories under /scratch/brown/$USER/

wooj@brown-fe02:/scratch/brown/wooj/SIMPLEG_WBM_COUPLING$ ls -al: :total 24 ::drwxr-xr-x 6 wooj itap 4096 Oct 19 08:59 .

drwx——— 12 wooj itap 4096 Oct 19 08:54 ..
drwxr-xr-x 3 wooj itap 4096 Oct 19 08:59 inputs
drwxr-xr-x 2 wooj itap 4096 Oct 19 08:59 runs
drwxr-xr-x 2 wooj itap 4096 Oct 19 08:58 SIF
drwxr-xr-x 2 wooj itap 4096 Oct 19 08:59 submit

* Submit a job wooj@brown-fe02:~$ sbatch /scratch/brown/wooj/SIMPLEG_WBM_COUPLING/submit/simpleg-wbm.sub Submitted batch job 12837875


* Checking status of a job

Image

wooj@brown-fe02:~$ squeue -j 12837875 JOBID USER ACCOUNT NAME NODES CPUS TIME_LIMIT ST TIME 12837875 wooj ssg simpleg-wbm 1 1 3-00:00:00 R 0:12 wooj@brown-fe02:~$

Created on , Last modified on